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Incontro Plenario ICSC Spoke 8

→ Europe/Rome
Fibonacci (CINECA)

Fibonacci

CINECA

Via Magnanelli 6/3
Andrea Cavalli (IIT), Francesco Pappalardo
Description

Incontro semestrale plenario di ICSC Spoke8 "Insilico medicine and omics data"

Link per collegamento da remoto: 

https://teams.microsoft.com/l/meetup-join/19%3ameeting_ZDA0ZTAyMmItMjdlNi00OWYwLWI3N2UtMGJmMWU2ZDJlOTBj%40thread.v2/0?context=%7b%22Tid%22%3a%22c5492249-84a0-43af-bd29-a7892e94b5b7%22%2c%22Oid%22%3a%220a8d695b-9dc6-436d-9bc0-df856eeed29b%22%7d

  • Monday, June 24
    • 2:00 PM → 2:15 PM
      Arrivo e registrazione partecipanti 15m
    • 2:15 PM → 2:30 PM
      Saluti Andrea Cavalli – Spoke Leader 15m
    • 2:30 PM → 4:00 PM
      WP4 Genome bioinformatics pipelines for GPU-based HPC infrastructures
      Convener: Chiara Romualdi (UniPD)
      presentazioneUNIPD_21_06_2024.pdf
      • 2:30 PM
        sgdGMF: a new scalable matrix factorization framework for high-dimensional omics data 25m
        Speaker: Cristian Castiglione (UniPD)
        Castiglione.pdf
      • 2:55 PM
        Dissecting tumor transcriptional heterogeneity using single-cell RNA-seq data 20m
        Speaker: Raffaele Calogero (UniTO)
        calogero_v1.pptx
      • 3:15 PM
        Integration of scRNAseq datasets for studying cellular heterogeneity in solid tumors 25m
        Speaker: Stefano Volinia (UniFE)
        24giugno2024.pdf
      • 3:40 PM
        Inosinome profiling by high-throughput sequencing 20m
        Speaker: Ernesto Picardi (UniBA)
        spoke8_HPC_bologna_24_6_2024_picardi.pptx
    • 4:00 PM → 4:30 PM
      Coffee Break 30m
    • 4:30 PM → 6:00 PM
      WP5 Development of clinical machine learning algorithms for EHRs and omics data (including radiomics)
      Convener: Luigi Terracciano (Humanitas)
      WP5.pptx
      • 4:30 PM
        Health Data Platform to unraveling the Genetic Complexity to define Novel Therapeutic Targets in Visceral Cancer 12m
        Speaker: Antonino Marsala (Humanitas)
        Humanitas_Data_Lake_update_CN1.pptx
      • 4:42 PM
        Patients-derived models as tool for personalized oncology 12m
        Speaker: Salvatore Piscuoglio (Humanitas)
      • 4:54 PM
        Genomic Insights into Pancreatic Cancer of an Italian Patient Cohort 12m
        Speaker: Federica Furia (IIT)
        PDAC-Furia.pptx
      • 5:06 PM
        Multi-omics prognostic analysis for PDA patients 12m
        Speakers: Gian Maria Zaccaria (PoliBA), Vitoantonio Bevilacqua (PoliBA)
      • 5:18 PM
        Enhancing ML models by synthetic omics data: recent advancements in generative AI for medical tabular data 12m
        Speaker: Marco Chierici (FBK)
        WP5_chierici_1.pptx
        WP5_chierici_2.pptx
      • 5:30 PM
        AI-Driven Holistic Healthcare Platform for Genomics and Digital Pathology 12m
        Speaker: Antonio De Nigro (Engineerig)
        Plenary Bologna ENG_v2.pdf
      • 5:42 PM
        Radiomics and AI techniques: selected experimental results on medical images of lung cancer, neurological diseases and COVID-19 12m
        Speaker: Francesca Brero (UniPV)
        Bologna_24June2024.pdf
    • 6:00 PM → 7:30 PM
      WP6 Drug-target studies and drug repurposing
      Convener: Giorgio Colombo
      BOLOGNA-24-06-24-COLOMBO.pptx
  • Tuesday, June 25
    • 10:00 AM → 10:15 AM
      Arrivo e registrazione presenze 15m
    • 10:15 AM → 11:00 AM
      Saluti della fondazione ICSC 45m
      Speakers: Alessia D'Orazio (Fondazione ICSC), Davide Salomoni (Fondazione ICSC), Matteo Zanaroli (Fondazione ICSC)
      20240625 Davide Salomoni Spoke 8.pdf
      Spoke8-meeting-25Giu2024.pdf
      Zanaroli - Spoke 8.pptx
    • 11:00 AM → 11:30 AM
      WP1 Implementation of modelling & simulation platforms (open source and commercial) through HPC solvers: WP1
      Convener: Francesco Pappalardo
      pres SP8-WP1_Giugno24.pptx
      UISS_FLU_GIU24.pptx
    • 11:30 AM → 12:00 PM
      Coffee break 30m
    • 12:00 PM → 1:30 PM
      WP3 Integrated digital data flow between clinics and HPC centres and Easy-to-use GUI for HPC solvers
      Convener: Barbara Martelli (INFN)
      20240625-plenaria-ICSC-Spoke8-stato del-WP3.pdf
      • 12:00 PM
        Roadmap generale per l'integrazione delle piattaforme cloud Spoke8 e Spoke0 15m
        Speaker: Giacinto Donvito (INFN Bari)
        Donvito_Spoke0_8.pdf
      • 12:15 PM
        Roadmap per l'integrazione delle piattaforme cloud Spoke8 e Spoke0- focus su gestione delle identità 15m
        Speaker: Francesco Giacomini (INFN CNAF)
        ICSC-Spoke8 Gestione Identità e Accessi.pdf
      • 12:30 PM
        Storage federation in DataCloud - integration roadmap between Spoke0 and Spoke8 15m
        Speaker: Antonino Troja (INFN Padova)
        Talk-WP3Troja.pdf
      • 12:45 PM
        Aggiornamento sulla piattaforma omics 15m
        Speaker: Elisa Rossi (CINECA)
        20240624-ICSC-Spoke8_OMICS_template (1).pdf
      • 1:00 PM
        Integrating Universal Immune System Simulator in a Cloud, GDPR compliant, environment 15m
        Speakers: Riccardo Rotondo (INFN Catania), Valentina Ientile (INFN Catania)
        20240625_UISS-Rotondo-Ientile (1).pdf
      • 1:15 PM
        Roadmap per l'abilitazione di AlmaHealthDB su piattaforma INFN-CINECA 15m
        Speaker: Serena Moscato (UniBO)
        ICSC_AHDB_2024_06_25_v2-Moscato.pptx
    • 1:30 PM → 2:00 PM
      Tempo a disposizione per meeting individuali/di piccoli gruppi per chiarimenti scientifici e amministrativi con gli Spoke leader, i WP leader e l’amministrazione dello Spoke 30m
    • 2:00 PM → 3:00 PM
      Pranzo 1h
    • 3:00 PM → 4:00 PM
      WP2 Digital Twins and In Silico Trials
      Convener: Marco Viceconti (UniBO)
      20240625_Atax-BDT_meeting_CINECA.pdf
    • 4:00 PM → 5:00 PM
      Tempo a disposizione per meeting individuali/di piccoli gruppi per chiarimenti scientifici e amministrativi con gli Spoke leader, i WP leader e l’amministrazione dello Spoke 1h
    • 5:00 PM → 5:30 PM
      Conclusioni e fine lavori 30m
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